IL_9H3G_219

3D structure

PDB id

9H3G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Arabidopsis thaliana 80S ribosome in complex with P- and E-site tRNAs and mRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

1.82 Å

Loop

Sequence

UGCAU*AUG

Length

8 nucleotides

Bulged bases

9H3G|1|h1|C|1275

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9H3G|1|h1|U|1273
9H3G|1|h1|G|1274
9H3G|1|h1|C|1275
9H3G|1|h1|A|1276
9H3G|1|h1|U|1277
*
9H3G|1|h1|A|1439
9H3G|1|h1|U|1440
9H3G|1|h1|G|1441

Current chains

Chain h1

Ribosomal RNA 18S

Nearby chains

Chain AA

Small ribosomal subunit protein uS3z

Chain AI

Small ribosomal subunit protein eS10z

Chain B1

Messenger RNA (poly-U)

Chain Ba

Small ribosomal subunit protein uS10y

Chain Ca

Small ribosomal subunit protein uS14z/uS14y/uS14x

Chain i2

Transfer RNA; tRNA