IL_9H3L_053

3D structure

PDB id

9H3L (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S subunit precursor C_(L29)-/(L22)-

Experimental method

ELECTRON MICROSCOPY

Resolution

5.84 Å

Loop

Sequence

GCAA*UGC

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9H3L_053 not in the Motif Atlas

Geometric match to IL_4V9F_072

Geometric discrepancy: 0.3558

The information below is about IL_4V9F_072

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_55516.2

Basepair signature

cWW-cWW-cSH-cWW

Number of instances in this motif group

7

Unit IDs

9H3L|1|A|G|2049
9H3L|1|A|C|2050
9H3L|1|A|A|2051
9H3L|1|A|A|2052
*
9H3L|1|A|U|2617
9H3L|1|A|G|2618
9H3L|1|A|C|2619

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain D

50S ribosomal protein L3