IL_9H3N_052

3D structure

PDB id

9H3N (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S subunit precursor C_(L22)-~H61

Experimental method

ELECTRON MICROSCOPY

Resolution

3.69 Å

Loop

Sequence

CGG*CUGG

Length

7 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9H3N_052 not in the Motif Atlas

Geometric match to IL_8VTW_096

Geometric discrepancy: 0.3341

The information below is about IL_8VTW_096

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_54650.3

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

16

Unit IDs

9H3N|1|A|C|2507
9H3N|1|A|G|2508
9H3N|1|A|G|2509
*
9H3N|1|A|C|2579
9H3N|1|A|U|2580
9H3N|1|A|G|2581
9H3N|1|A|G|2582

Current chains

Chain A

23S ribosomal RNA

Nearby chains