3D structure

PDB id
9H3N (explore in PDB, NAKB, or RNA 3D Hub)
Description
50S subunit precursor C_(L22)-~H61
Experimental method
ELECTRON MICROSCOPY
Resolution
3.69 Å

Loop

Sequence
UGUAAG*UUGAG
Length
11 nucleotides
Bulged bases
9H3N|1|A|U|2849
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_9H3N_067 not in the Motif Atlas
Homologous match to IL_4WF9_108
Geometric discrepancy: 0.2824
The information below is about IL_4WF9_108
Detailed Annotation
tHS double platform
Broad Annotation
No text annotation
Motif group
IL_70411.2
Basepair signature
cWW-tSH-L-tHH-L-cWW
Number of instances in this motif group
7

Unit IDs

9H3N|1|A|U|2847
9H3N|1|A|G|2848
9H3N|1|A|U|2849
9H3N|1|A|A|2850
9H3N|1|A|A|2851
9H3N|1|A|G|2852
*
9H3N|1|A|U|2865
9H3N|1|A|U|2866
9H3N|1|A|G|2867
9H3N|1|A|A|2868
9H3N|1|A|G|2869

Current chains

Chain A
23S ribosomal RNA

Nearby chains

Chain N
Large ribosomal subunit protein bL17

Coloring options:


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