IL_9H3O_030

3D structure

PDB id

9H3O (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S subunit precursor C_(L22)-_GAC

Experimental method

ELECTRON MICROSCOPY

Resolution

4.54 Å

Loop

Sequence

UUAAGUGGGAAAC*GGAAGAUGUAACGGGGCUAAA

Length

34 nucleotides

Bulged bases

9H3O|1|A|A|1127, 9H3O|1|A|U|1130

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9H3O|1|A|U|1018
9H3O|1|A|U|1019
9H3O|1|A|A|1020
9H3O|1|A|A|1021
9H3O|1|A|G|1022
9H3O|1|A|U|1023
9H3O|1|A|G|1024
9H3O|1|A|G|1025
9H3O|1|A|G|1026
9H3O|1|A|A|1027
9H3O|1|A|A|1028
9H3O|1|A|A|1029
9H3O|1|A|C|1030
*
9H3O|1|A|G|1124
9H3O|1|A|G|1125
9H3O|1|A|A|1126
9H3O|1|A|A|1127
9H3O|1|A|G|1128
9H3O|1|A|A|1129
9H3O|1|A|U|1130
9H3O|1|A|G|1131
9H3O|1|A|U|1132
9H3O|1|A|A|1133
9H3O|1|A|A|1134
9H3O|1|A|C|1135
9H3O|1|A|G|1136
9H3O|1|A|G|1137
9H3O|1|A|G|1138
9H3O|1|A|G|1139
9H3O|1|A|C|1140
9H3O|1|A|U|1141
9H3O|1|A|A|1142
9H3O|1|A|A|1143
9H3O|1|A|A|1144

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 4

Large ribosomal subunit protein bL36A

Chain J

Large ribosomal subunit protein uL13