IL_9H3O_033

3D structure

PDB id

9H3O (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S subunit precursor C_(L22)-_GAC

Experimental method

ELECTRON MICROSCOPY

Resolution

4.54 Å

Loop

Sequence

CCCAGACAGCC*GGUCGAG

Length

18 nucleotides

Bulged bases

9H3O|1|A|A|1046

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9H3O|1|A|C|1043
9H3O|1|A|C|1044
9H3O|1|A|C|1045
9H3O|1|A|A|1046
9H3O|1|A|G|1047
9H3O|1|A|A|1048
9H3O|1|A|C|1049
9H3O|1|A|A|1050
9H3O|1|A|G|1051
9H3O|1|A|C|1052
9H3O|1|A|C|1053
*
9H3O|1|A|G|1106
9H3O|1|A|G|1107
9H3O|1|A|U|1108
9H3O|1|A|C|1109
9H3O|1|A|G|1110
9H3O|1|A|A|1111
9H3O|1|A|G|1112

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain G

Large ribosomal subunit protein uL6