IL_9H3P_061

3D structure

PDB id

9H3P (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S subunit precursor C-CP_(L22)-

Experimental method

ELECTRON MICROSCOPY

Resolution

7.06 Å

Loop

Sequence

GGUUC*GGCC

Length

9 nucleotides

Bulged bases

9H3P|1|A|U|2402

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9H3P_061 not in the Motif Atlas

Geometric match to IL_3WBM_003

Geometric discrepancy: 0.3001

The information below is about IL_3WBM_003

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_85033.2

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

35

Unit IDs

9H3P|1|A|G|2399
9H3P|1|A|G|2400
9H3P|1|A|U|2401
9H3P|1|A|U|2402
9H3P|1|A|C|2403
*
9H3P|1|A|G|2414
9H3P|1|A|G|2415
9H3P|1|A|C|2416
9H3P|1|A|C|2417

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain L

Large ribosomal subunit protein uL15