3D structure

PDB id
9H3Q (explore in PDB, NAKB, or RNA 3D Hub)
Description
50S subunit precursor C-CP_YjgA_(L22)-~H61
Experimental method
ELECTRON MICROSCOPY
Resolution
4.02 Å

Loop

Sequence
CCCAGACAGC*GUCGAG
Length
16 nucleotides
Bulged bases
9H3Q|1|A|C|1045, 9H3Q|1|A|A|1046
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9H3Q|1|A|C|1043
9H3Q|1|A|C|1044
9H3Q|1|A|C|1045
9H3Q|1|A|A|1046
9H3Q|1|A|G|1047
9H3Q|1|A|A|1048
9H3Q|1|A|C|1049
9H3Q|1|A|A|1050
9H3Q|1|A|G|1051
9H3Q|1|A|C|1052
*
9H3Q|1|A|G|1107
9H3Q|1|A|U|1108
9H3Q|1|A|C|1109
9H3Q|1|A|G|1110
9H3Q|1|A|A|1111
9H3Q|1|A|G|1112

Current chains

Chain A
23S ribosomal RNA

Nearby chains

Chain G
Large ribosomal subunit protein uL6

Coloring options:

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