IL_9H3U_028

3D structure

PDB id

9H3U (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S subunit precursor C_H68

Experimental method

ELECTRON MICROSCOPY

Resolution

3.47 Å

Loop

Sequence

CUAAG*CGAAG

Length

10 nucleotides

Bulged bases

9H3U|1|A|A|1156

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9H3U_028 not in the Motif Atlas

Homologous match to IL_7A0S_033

Geometric discrepancy: 0.1462

The information below is about IL_7A0S_033

Detailed Annotation

UAA/GAN

Broad Annotation

No text annotation

Motif group

IL_38507.2

Basepair signature

cWW-tWH-L-tHS-cWW

Number of instances in this motif group

16

Unit IDs

9H3U|1|A|C|998
9H3U|1|A|U|999
9H3U|1|A|A|1000
9H3U|1|A|A|1001
9H3U|1|A|G|1002
*
9H3U|1|A|C|1153
9H3U|1|A|G|1154
9H3U|1|A|A|1155
9H3U|1|A|A|1156
9H3U|1|A|G|1157

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain Q

Large ribosomal subunit protein bL20

Chain R

Large ribosomal subunit protein bL21

Chain Z

Large ribosomal subunit protein uL30