IL_9H3W_046

3D structure

PDB id

9H3W (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S subunit precursor C-CP_H68

Experimental method

ELECTRON MICROSCOPY

Resolution

5.38 Å

Loop

Sequence

CCC*GG

Length

5 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9H3W_046 not in the Motif Atlas

Geometric match to IL_8C3A_091

Geometric discrepancy: 0.2533

The information below is about IL_8C3A_091

Detailed Annotation

Single stack bend

Broad Annotation

No text annotation

Motif group

IL_05035.2

Basepair signature

cWW-L-cWW

Number of instances in this motif group

38

Unit IDs

9H3W|1|A|C|1349
9H3W|1|A|C|1350
9H3W|1|A|C|1351
*
9H3W|1|A|G|1381
9H3W|1|A|G|1382

Current chains

Chain A

23S ribosomal RNA

Nearby chains