IL_9H3W_083

3D structure

PDB id

9H3W (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S subunit precursor C-CP_H68

Experimental method

ELECTRON MICROSCOPY

Resolution

5.38 Å

Loop

Sequence

GGAGG*CCGACCUUGAAAUAC

Length

20 nucleotides

Bulged bases

9H3W|1|A|A|2163, 9H3W|1|A|C|2164, 9H3W|1|A|U|2172, 9H3W|1|A|A|2173

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9H3W|1|A|G|2124
9H3W|1|A|G|2125
9H3W|1|A|A|2126
9H3W|1|A|G|2127
9H3W|1|A|G|2128
*
9H3W|1|A|C|2160
9H3W|1|A|C|2161
9H3W|1|A|G|2162
9H3W|1|A|A|2163
9H3W|1|A|C|2164
9H3W|1|A|C|2165
9H3W|1|A|U|2166
9H3W|1|A|U|2167
9H3W|1|A|G|2168
9H3W|1|A|A|2169
9H3W|1|A|A|2170
9H3W|1|A|A|2171
9H3W|1|A|U|2172
9H3W|1|A|A|2173
9H3W|1|A|C|2174

Current chains

Chain A

23S ribosomal RNA

Nearby chains