IL_9H3X_019

3D structure

PDB id

9H3X (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S subunit precursor C-CP_H68_L35

Experimental method

ELECTRON MICROSCOPY

Resolution

4.12 Å

Loop

Sequence

CGAC*GCG

Length

7 nucleotides

Bulged bases

9H3X|1|A|G|738

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9H3X_019 not in the Motif Atlas

Geometric match to IL_5Z1I_003

Geometric discrepancy: 0.3848

The information below is about IL_5Z1I_003

Detailed Annotation

Decoding loop related

Broad Annotation

Decoding loop related

Motif group

IL_31737.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

11

Unit IDs

9H3X|1|A|C|737
9H3X|1|A|G|738
9H3X|1|A|A|739
9H3X|1|A|C|740
*
9H3X|1|A|G|757
9H3X|1|A|C|758
9H3X|1|A|G|759

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 2

Large ribosomal subunit protein bL34