3D structure

PDB id
9H51 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Assembly intermediate of human mitochondrial ribosome small subunit in complex with PUS1, METTL15 and RBFA(IN conformation) (state M1)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.1 Å

Loop

Sequence
CUUGCUCAG*CCCAUG
Length
15 nucleotides
Bulged bases
9H51|1|A|C|1250, 9H51|1|A|U|1344
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9H51|1|A|C|1244
9H51|1|A|U|1245
9H51|1|A|U|1246
9H51|1|A|G|1247
9H51|1|A|C|1248
9H51|1|A|U|1249
9H51|1|A|C|1250
9H51|1|A|A|1251
9H51|1|A|G|1252
*
9H51|1|A|C|1340
9H51|1|A|C|1341
9H51|1|A|C|1342
9H51|1|A|A|1343
9H51|1|A|U|1344
9H51|1|A|G|1345

Current chains

Chain A
RNA (969-MER)

Nearby chains

Chain 4
Pentatricopeptide repeat domain-containing protein 3, mitochondrial
Chain D
28S ribosomal protein S5, mitochondrial
Chain K
28S ribosomal protein S14, mitochondrial
Chain Z
28S ribosomal protein S33, mitochondrial

Coloring options:

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