IL_9H52_027

3D structure

PDB id

9H52 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Assembly intermediate of human mitochondrial ribosome small subunit in complex with NOA1, ERAL1, METTL17, MCAT and TFB1M (state N1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

UAUA*UG

Length

6 nucleotides

Bulged bases

9H52|1|A|A|1258, 9H52|1|A|U|1259

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9H52_027 not in the Motif Atlas

Geometric match to IL_9I0V_004

Geometric discrepancy: 0.198

The information below is about IL_9I0V_004

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_71421.5

Basepair signature

cWW-cWW

Number of instances in this motif group

36

Unit IDs

9H52|1|A|U|1257
9H52|1|A|A|1258
9H52|1|A|U|1259
9H52|1|A|A|1260
*
9H52|1|A|U|1335
9H52|1|A|G|1336

Current chains

Chain A

12S mitochondrial rRNA

Nearby chains

Chain 7

Isoform 2 of Ribosome assembly protein METTL17, mitochondrial