IL_9H6I_010
3D structure
- PDB id
- 9H6I (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Arabidopsis thaliana 80S ribosome in complex with P- and E-site tRNAs, mRNA, and thermospermine
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.2 Å
Loop
- Sequence
- CUGAG(PSU)UU*A(OMU)CAA(OMU)AAG
- Length
- 17 nucleotides
- Bulged bases
- 9H6I|1|A|A|47
- QA status
- Modified nucleotides: PSU, OMU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9H6I|1|A|C|29
9H6I|1|A|U|30
9H6I|1|A|G|31
9H6I|1|A|A|32
9H6I|1|A|G|33
9H6I|1|A|PSU|34
9H6I|1|A|U|35
9H6I|1|A|U|36
*
9H6I|1|A|A|43
9H6I|1|A|OMU|44
9H6I|1|A|C|45
9H6I|1|A|A|46
9H6I|1|A|A|47
9H6I|1|A|OMU|48
9H6I|1|A|A|49
9H6I|1|A|A|50
9H6I|1|A|G|51
Current chains
- Chain A
- Ribosomal RNA 25S
Nearby chains
- Chain AG
- Large ribosomal subunit protein eL13z
- Chain AY
- Large ribosomal subunit protein eL37z
- Chain BD
- Large ribosomal subunit protein eL42z/eL42y
- Chain Ea
- Large ribosomal subunit protein eL15z
- Chain Ha
- Large ribosomal subunit protein uL15x
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