9H6I Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_9H6I_001 | 1/2/13:22 | tRNA D-loop | homologous HL_6JXM_001 HL_20490.1 | |
| HL_9H6I_002 | 1/2/31:39 | tRNA anticodon loop | homologous HL_4YCO_002 HL_81376.3 | |
| HL_9H6I_003 | 1/2/53:61 | T-loop with 2 stacked bulged bases | homologous HL_4YYE_003 HL_33597.3 | |
| HL_9H6I_004 | 1/3/51:60 | No text annotation | ||
| HL_9H6I_005 | 1/3/72:95 | No text annotation | ||
| HL_9H6I_006 | 1/3/112:118 | No text annotation | ||
| HL_9H6I_008 | 1/A/36:43 | No text annotation | ||
| HL_9H6I_009 | 1/A/67:72 | No text annotation | ||
| HL_9H6I_010 | 1/A/88:94 | No text annotation | ||
| HL_9H6I_011 | 1/A/130:134 | No text annotation | ||
| HL_9H6I_012 | 1/A/191:198 | No text annotation | ||
| HL_9H6I_013 | 1/A/205:209 | No text annotation | ||
| HL_9H6I_014 | 1/A/213:221 | No text annotation | ||
| HL_9H6I_015 | 1/A/275:284 | No text annotation | ||
| HL_9H6I_016 | 1/A/300:309 | No text annotation | ||
| HL_9H6I_017 | 1/A/354:359 | No text annotation | ||
| HL_9H6I_018 | 1/A/379:384 | No text annotation | ||
| HL_9H6I_020 | 1/A/533:543 | No text annotation | ||
| HL_9H6I_021 | 1/A/588:593 | No text annotation | ||
| HL_9H6I_022 | 1/A/599:604 | No text annotation | ||
| HL_9H6I_023 | 1/A/652:661 | No text annotation | ||
| HL_9H6I_024 | 1/A/698:707 | No text annotation | ||
| HL_9H6I_025 | 1/A/721:726 | No text annotation | ||
| HL_9H6I_026 | 1/A/742:747 | No text annotation | ||
| HL_9H6I_027 | 1/A/772:777 | No text annotation | ||
| HL_9H6I_028 | 1/A/853:858 | No text annotation | ||
| HL_9H6I_029 | 1/A/885:894 | No text annotation | ||
| HL_9H6I_030 | 1/A/919:927 | No text annotation | ||
| HL_9H6I_031 | 1/A/967:972 | No text annotation | ||
| HL_9H6I_033 | 1/A/1086:1093 | No text annotation | ||
| HL_9H6I_034 | 1/A/1135:1141 | No text annotation | ||
| HL_9H6I_035 | 1/A/1157:1164 | No text annotation | ||
| HL_9H6I_036 | 1/A/1357:1367 | No text annotation | ||
| HL_9H6I_037 | 1/A/1412:1417 | No text annotation | ||
| HL_9H6I_038 | 1/A/1471:1479 | No text annotation | ||
| HL_9H6I_039 | 1/A/1514:1522 | No text annotation | ||
| HL_9H6I_040 | 1/A/1553:1558 | No text annotation | ||
| HL_9H6I_041 | 1/A/1571:1577 | No text annotation | ||
| HL_9H6I_042 | 1/A/1600:1609 | No text annotation | ||
| HL_9H6I_043 | 1/A/1634:1639 | No text annotation | ||
| HL_9H6I_044 | 1/A/1680:1688 | No text annotation | ||
| HL_9H6I_045 | 1/A/1720:1726 | No text annotation | ||
| HL_9H6I_046 | 1/A/1760:1768 | No text annotation | ||
| HL_9H6I_047 | 1/A/1794:1798 | No text annotation | ||
| HL_9H6I_048 | 1/A/1846:1853 | No text annotation | ||
| HL_9H6I_049 | 1/A/1864:1870 | No text annotation | ||
| HL_9H6I_050 | 1/A/1925:1930 | No text annotation | ||
| HL_9H6I_051 | 1/A/2109:2113 | No text annotation | ||
| HL_9H6I_052 | 1/A/2134:2144 | No text annotation | ||
| HL_9H6I_053 | 1/A/2163:2168 | No text annotation | ||
| HL_9H6I_054 | 1/A/2218:2223 | No text annotation | ||
| HL_9H6I_055 | 1/A/2251:2261 | No text annotation | ||
| HL_9H6I_056 | 1/A/2290:2298 | No text annotation | ||
| HL_9H6I_057 | 1/A/2367:2376 | No text annotation | ||
| HL_9H6I_058 | 1/A/2615:2623 | No text annotation | ||
| HL_9H6I_059 | 1/A/2632:2644 | No text annotation | ||
| HL_9H6I_060 | 1/A/2672:2680 | No text annotation | ||
| HL_9H6I_061 | 1/A/2692:2699 | No text annotation | ||
| HL_9H6I_062 | 1/A/2723:2731 | No text annotation | ||
| HL_9H6I_063 | 1/A/2743:2748 | No text annotation | ||
| HL_9H6I_064 | 1/A/2775:2783 | No text annotation | ||
| HL_9H6I_065 | 1/A/2839:2847 | No text annotation | ||
| HL_9H6I_066 | 1/A/2896:2903 | No text annotation | ||
| HL_9H6I_067 | 1/A/2919:2925 | No text annotation | ||
| HL_9H6I_068 | 1/A/2962:2967 | No text annotation | ||
| HL_9H6I_069 | 1/A/3023:3028 | No text annotation | ||
| HL_9H6I_070 | 1/A/3066:3071 | No text annotation | ||
| HL_9H6I_071 | 1/A/3108:3122 | No text annotation | ||
| HL_9H6I_072 | 1/A/3185:3189 | No text annotation | ||
| HL_9H6I_073 | 1/A/3228:3235 | No text annotation | ||
| HL_9H6I_074 | 1/A/3290:3298 | No text annotation | ||
| HL_9H6I_075 | 1/A/3336:3343 | No text annotation | ||
| HL_9H6I_076 | 1/C3/32:45 | No text annotation | geometric HL_9E6Q_068 HL_97756.3 | |
| HL_9H6I_077 | 1/C3/36:41 | No text annotation | homologous HL_4V9F_071 HL_59381.2 | |
| HL_9H6I_078 | 1/C3/86:91 | GNRA | homologous HL_4V9F_072 HL_34789.4 | |
| HL_9H6I_079 | 1/W2/13:22 | tRNA D-loop | homologous HL_6JXM_001 HL_20490.1 | |
| HL_9H6I_080 | 1/W2/31:39 | tRNA anticodon loop | homologous HL_9MTS_102 HL_81376.3 | |
| HL_9H6I_081 | 1/W2/53:61 | T-loop with 2 stacked bulged bases | homologous HL_4YYE_003 HL_33597.3 | |
| HL_9H6I_082 | 1/h1/7:17 | No text annotation | ||
| HL_9H6I_083 | 1/h1/70:82 | No text annotation | ||
| HL_9H6I_084 | 1/h1/152:158 | No text annotation | ||
| HL_9H6I_086 | 1/h1/244:251 | No text annotation | ||
| HL_9H6I_087 | 1/h1/332:340 | No text annotation | ||
| HL_9H6I_088 | 1/h1/370:375 | No text annotation | ||
| HL_9H6I_089 | 1/h1/395:406 | No text annotation | ||
| HL_9H6I_090 | 1/h1/416:421 | No text annotation | ||
| HL_9H6I_091 | 1/h1/452:458 | No text annotation | ||
| HL_9H6I_092 | 1/h1/522:534 | No text annotation | ||
| HL_9H6I_093 | 1/h1/571:576 | No text annotation | ||
| HL_9H6I_094 | 1/h1/767:775 | No text annotation | ||
| HL_9H6I_095 | 1/h1/780:785 | No text annotation | ||
| HL_9H6I_096 | 1/h1/901:910 | No text annotation | ||
| HL_9H6I_097 | 1/h1/938:943 | No text annotation | ||
| HL_9H6I_098 | 1/h1/998:1008 | No text annotation | ||
| HL_9H6I_099 | 1/h1/1058:1064 | No text annotation | ||
| HL_9H6I_100 | 1/h1/1085:1090 | No text annotation | ||
| HL_9H6I_101 | 1/h1/1122:1127 | No text annotation | ||
| HL_9H6I_102 | 1/h1/1189:1198 | No text annotation | ||
| HL_9H6I_103 | 1/h1/1239:1248 | No text annotation | ||
| HL_9H6I_104 | 1/h1/1297:1302 | No text annotation | ||
| HL_9H6I_105 | 1/h1/1310:1317 | No text annotation | ||
| HL_9H6I_106 | 1/h1/1361:1366 | No text annotation | ||
| HL_9H6I_107 | 1/h1/1399:1405 | No text annotation | ||
| HL_9H6I_108 | 1/h1/1504:1509 | No text annotation | ||
| HL_9H6I_109 | 1/h1/1552:1563 | No text annotation | ||
| HL_9H6I_110 | 1/h1/1596:1604 | No text annotation | ||
| HL_9H6I_111 | 1/h1/1782:1787 | No text annotation |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| HL_9H6I_007 | No text annotation | ||
| HL_9H6I_019 | No text annotation | ||
| HL_9H6I_032 | No text annotation | ||
| HL_9H6I_085 | No text annotation |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_9H6I_001 | 1/2/4:6, 1/2/67:69 | No text annotation | homologous IL_7VNV_001 NA | |
| IL_9H6I_002 | 1/3/17:23, 1/A/401:407 | No text annotation | ||
| IL_9H6I_003 | 1/3/29:30, 1/A/334:336 | No text annotation | ||
| IL_9H6I_004 | 1/3/68:69, 1/3/98:100 | No text annotation | ||
| IL_9H6I_005 | 1/3/123:127, 1/3/136:140 | No text annotation | ||
| IL_9H6I_006 | 1/3/150:151, 1/A/11:13 | No text annotation | ||
| IL_9H6I_007 | 1/3/156:158, 1/A/5:6 | No text annotation | ||
| IL_9H6I_008 | 1/3/160:162, 1/A/1:3 | No text annotation | ||
| IL_9H6I_009 | 1/A/25:26, 1/A/54:56 | No text annotation | ||
| IL_9H6I_010 | 1/A/29:36, 1/A/43:51 | No text annotation | ||
| IL_9H6I_011 | 1/A/80:88, 1/A/94:101 | No text annotation | ||
| IL_9H6I_012 | 1/A/121:122, 1/A/142:147 | No text annotation | ||
| IL_9H6I_013 | 1/A/157:158, 1/A/257:259 | No text annotation | ||
| IL_9H6I_014 | 1/A/162:164, 1/A/252:253 | No text annotation | ||
| IL_9H6I_015 | 1/A/166:168, 1/A/244:250 | No text annotation | ||
| IL_9H6I_016 | 1/A/174:176, 1/A/234:238 | No text annotation | ||
| IL_9H6I_017 | 1/A/186:188, 1/A/201:202 | No text annotation | ||
| IL_9H6I_018 | 1/A/373:376, 1/A/387:400 | No text annotation | ||
| IL_9H6I_019 | 1/A/430:431, 1/A/636:638 | No text annotation | ||
| IL_9H6I_020 | 1/A/433:436, 1/A/633:634 | No text annotation | ||
| IL_9H6I_021 | 1/A/447:448, 1/A/486:488 | No text annotation | ||
| IL_9H6I_022 | 1/A/451:455, 1/A/478:483 | No text annotation | ||
| IL_9H6I_024 | 1/A/497:499, 1/A/627:629 | No text annotation | ||
| IL_9H6I_025 | 1/A/521:527, 1/A/550:555 | No text annotation | ||
| IL_9H6I_026 | 1/A/528:529, 1/A/547:549 | No text annotation | ||
| IL_9H6I_027 | 1/A/596:598, 1/A/605:608 | No text annotation | ||
| IL_9H6I_028 | 1/A/680:682, 1/A/801:803 | No text annotation | ||
| IL_9H6I_029 | 1/A/692:696, 1/A/709:714 | No text annotation | ||
| IL_9H6I_030 | 1/A/736:740, 1/A/749:754 | No text annotation | ||
| IL_9H6I_031 | 1/A/761:762, 1/A/788:790 | No text annotation | ||
| IL_9H6I_032 | 1/A/764:765, 1/A/784:786 | No text annotation | ||
| IL_9H6I_033 | 1/A/766:771, 1/A/778:783 | No text annotation | ||
| IL_9H6I_034 | 1/A/812:814, 1/A/947:949 | No text annotation | ||
| IL_9H6I_035 | 1/A/814:818, 1/A/940:947 | No text annotation | ||
| IL_9H6I_036 | 1/A/837:838, 1/A/904:906 | No text annotation | ||
| IL_9H6I_037 | 1/A/842:847, 1/A/864:870 | No text annotation | ||
| IL_9H6I_038 | 1/A/878:881, 1/A/897:899 | No text annotation | ||
| IL_9H6I_039 | 1/A/882:884, 1/A/895:896 | No text annotation | ||
| IL_9H6I_040 | 1/A/916:918, 1/A/928:932 | No text annotation | ||
| IL_9H6I_041 | 1/A/963:965, 1/A/974:976 | No text annotation | ||
| IL_9H6I_042 | 1/A/978:979, 1/A/1120:1122 | No text annotation | ||
| IL_9H6I_043 | 1/A/986:993, 1/A/1110:1113 | No text annotation | ||
| IL_9H6I_044 | 1/A/994:996, 1/A/1108:1109 | No text annotation | ||
| IL_9H6I_045 | 1/A/1002:1008, 1/A/1062:1068 | No text annotation | ||
| IL_9H6I_046 | 1/A/1008:1009, 1/A/1060:1062 | No text annotation | ||
| IL_9H6I_047 | 1/A/1010:1015, 1/A/1056:1059 | No text annotation | ||
| IL_9H6I_048 | 1/A/1017:1020, 1/A/1051:1054 | No text annotation | ||
| IL_9H6I_049 | 1/A/1020:1022, 1/A/1049:1051 | No text annotation | ||
| IL_9H6I_050 | 1/A/1024:1029, 1/A/1044:1047 | No text annotation | ||
| IL_9H6I_051 | 1/A/1078:1080, 1/A/1098:1100 | No text annotation | ||
| IL_9H6I_052 | 1/A/1084:1086, 1/A/1093:1094 | No text annotation | ||
| IL_9H6I_053 | 1/A/1129:1131, 1/A/1145:1147 | No text annotation | ||
| IL_9H6I_055 | 1/A/1176:1180, 1/A/1338:1342 | No text annotation | ||
| IL_9H6I_056 | 1/A/1182:1189, 1/A/1335:1336 | No text annotation | ||
| IL_9H6I_057 | 1/A/1189:1191, 1/A/1334:1335 | No text annotation | ||
| IL_9H6I_058 | 1/A/1196:1204, 1/A/1324:1329 | No text annotation | ||
| IL_9H6I_059 | 1/A/1204:1215, 1/A/1309:1324 | No text annotation | ||
| IL_9H6I_060 | 1/A/1217:1219, 1/A/1306:1307 | No text annotation | ||
| IL_9H6I_061 | 1/A/1224:1226, 1/A/1299:1301 | No text annotation | ||
| IL_9H6I_062 | 1/A/1386:1388, 1/A/1437:1440 | No text annotation | ||
| IL_9H6I_063 | 1/A/1397:1405, 1/A/1423:1428 | No text annotation | ||
| IL_9H6I_064 | 1/A/1407:1409, 1/A/1420:1421 | No text annotation | ||
| IL_9H6I_065 | 1/A/1453:1459, 1/A/2352:2357 | No text annotation | ||
| IL_9H6I_066 | 1/A/1501:1504, 1/A/1837:1838 | No text annotation | ||
| IL_9H6I_067 | 1/A/1510:1514, 1/A/1522:1524 | No text annotation | ||
| IL_9H6I_068 | 1/A/1541:1545, 1/A/1586:1591 | No text annotation | ||
| IL_9H6I_069 | 1/A/1546:1547, 1/A/1583:1585 | No text annotation | ||
| IL_9H6I_070 | 1/A/1549:1550, 1/A/1563:1565 | No text annotation | ||
| IL_9H6I_071 | 1/A/1550:1551, 1/A/1560:1563 | No text annotation | ||
| IL_9H6I_072 | 1/A/1619:1621, 1/A/1827:1828 | No text annotation | ||
| IL_9H6I_073 | 1/A/1624:1626, 1/A/1821:1824 | No text annotation | ||
| IL_9H6I_074 | 1/A/1628:1631, 1/A/1813:1819 | No text annotation | ||
| IL_9H6I_075 | 1/A/1645:1649, 1/A/1808:1812 | No text annotation | ||
| IL_9H6I_076 | 1/A/1661:1663, 1/A/1788:1790 | No text annotation | ||
| IL_9H6I_077 | 1/A/1669:1670, 1/A/1780:1782 | No text annotation | ||
| IL_9H6I_078 | 1/A/1670:1671, 1/A/1778:1780 | No text annotation | ||
| IL_9H6I_079 | 1/A/1675:1677, 1/A/1691:1693 | No text annotation | ||
| IL_9H6I_080 | 1/A/1694:1698, 1/A/1748:1753 | No text annotation | ||
| IL_9H6I_081 | 1/A/1702:1703, 1/A/1742:1744 | No text annotation | ||
| IL_9H6I_082 | 1/A/1703:1708, 1/A/1738:1742 | No text annotation | ||
| IL_9H6I_083 | 1/A/1712:1718, 1/A/1728:1734 | No text annotation | ||
| IL_9H6I_084 | 1/A/1885:1891, 1/A/2344:2347 | No text annotation | ||
| IL_9H6I_085 | 1/A/1897:1899, 1/A/2336:2338 | No text annotation | ||
| IL_9H6I_086 | 1/A/1900:1903, 1/A/2334:2335 | No text annotation | ||
| IL_9H6I_087 | 1/A/1900:1908, 1/A/2331:2335 | No text annotation | ||
| IL_9H6I_088 | 1/A/1903:1908, 1/A/2331:2334 | No text annotation | ||
| IL_9H6I_089 | 1/A/1920:1925, 1/A/1930:1936 | No text annotation | ||
| IL_9H6I_090 | 1/A/1942:1944, 1/A/2105:2107 | No text annotation | ||
| IL_9H6I_091 | 1/A/1949:1950, 1/A/2097:2100 | No text annotation | ||
| IL_9H6I_092 | 1/A/2127:2128, 1/A/2321:2323 | No text annotation | ||
| IL_9H6I_093 | 1/A/2155:2160, 1/A/2171:2178 | No text annotation | ||
| IL_9H6I_094 | 1/A/2194:2197, 1/A/2243:2244 | No text annotation | ||
| IL_9H6I_095 | 1/A/2198:2199, 1/A/2239:2242 | No text annotation | ||
| IL_9H6I_096 | 1/A/2202:2204, 1/A/2235:2236 | No text annotation | ||
| IL_9H6I_097 | 1/A/2204:2208, 1/A/2233:2235 | No text annotation | ||
| IL_9H6I_098 | 1/A/2209:2215, 1/A/2226:2232 | No text annotation | ||
| IL_9H6I_099 | 1/A/2274:2275, 1/A/2305:2308 | No text annotation | ||
| IL_9H6I_100 | 1/A/2275:2286, 1/A/2302:2305 | No text annotation | ||
| IL_9H6I_101 | 1/A/2389:2392, 1/A/2985:2987 | No text annotation | ||
| IL_9H6I_102 | 1/A/2394:2396, 1/A/2980:2983 | No text annotation | ||
| IL_9H6I_103 | 1/A/2407:2409, 1/A/2810:2811 | No text annotation | ||
| IL_9H6I_104 | 1/A/2410:2411, 1/A/2806:2809 | No text annotation | ||
| IL_9H6I_105 | 1/A/2421:2423, 1/A/2603:2606 | No text annotation | ||
| IL_9H6I_106 | 1/A/2425:2427, 1/A/2599:2601 | No text annotation | ||
| IL_9H6I_109 | 1/A/2518:2524, 1/A/2583:2586 | No text annotation | ||
| IL_9H6I_110 | 1/A/2613:2614, 1/A/2624:2626 | No text annotation | ||
| IL_9H6I_111 | 1/A/2627:2629, 1/A/2647:2649 | No text annotation | ||
| IL_9H6I_112 | 1/A/2665:2667, 1/A/2685:2689 | No text annotation | ||
| IL_9H6I_113 | 1/A/2713:2715, 1/A/2739:2740 | No text annotation | ||
| IL_9H6I_114 | 1/A/2717:2720, 1/A/2734:2737 | No text annotation | ||
| IL_9H6I_115 | 1/A/2769:2772, 1/A/2786:2787 | No text annotation | ||
| IL_9H6I_116 | 1/A/2822:2823, 1/A/2864:2866 | No text annotation | ||
| IL_9H6I_117 | 1/A/2823:2825, 1/A/2862:2864 | No text annotation | ||
| IL_9H6I_118 | 1/A/2825:2827, 1/A/2861:2862 | No text annotation | ||
| IL_9H6I_119 | 1/A/2827:2829, 1/A/2857:2861 | No text annotation | ||
| IL_9H6I_120 | 1/A/2834:2838, 1/A/2848:2852 | No text annotation | ||
| IL_9H6I_121 | 1/A/2875:2876, 1/A/2948:2950 | No text annotation | ||
| IL_9H6I_122 | 1/A/2878:2880, 1/A/2942:2946 | No text annotation | ||
| IL_9H6I_123 | 1/A/2880:2881, 1/A/2939:2942 | No text annotation | ||
| IL_9H6I_124 | 1/A/2890:2892, 1/A/2907:2911 | No text annotation | ||
| IL_9H6I_125 | 1/A/2917:2919, 1/A/2925:2927 | No text annotation | ||
| IL_9H6I_126 | 1/A/2959:2960, 1/A/2969:2971 | No text annotation | ||
| IL_9H6I_127 | 1/A/3002:3005, 1/A/3137:3141 | No text annotation | ||
| IL_9H6I_128 | 1/A/3010:3012, 1/A/3038:3040 | No text annotation | ||
| IL_9H6I_129 | 1/A/3016:3023, 1/A/3028:3034 | No text annotation | ||
| IL_9H6I_130 | 1/A/3045:3049, 1/A/3089:3092 | No text annotation | ||
| IL_9H6I_131 | 1/A/3052:3057, 1/A/3082:3086 | No text annotation | ||
| IL_9H6I_132 | 1/A/3061:3062, 1/A/3075:3078 | No text annotation | ||
| IL_9H6I_133 | 1/A/3101:3105, 1/A/3125:3129 | No text annotation | ||
| IL_9H6I_134 | 1/A/3160:3162, 1/A/3269:3271 | No text annotation | ||
| IL_9H6I_135 | 1/A/3170:3172, 1/A/3199:3200 | No text annotation | ||
| IL_9H6I_136 | 1/A/3173:3181, 1/A/3193:3198 | No text annotation | ||
| IL_9H6I_137 | 1/A/3182:3184, 1/A/3190:3192 | No text annotation | ||
| IL_9H6I_138 | 1/A/3213:3219, 1/A/3244:3247 | No text annotation | ||
| IL_9H6I_139 | 1/A/3221:3225, 1/A/3238:3242 | No text annotation | ||
| IL_9H6I_140 | 1/A/3287:3290, 1/A/3298:3301 | No text annotation | ||
| IL_9H6I_141 | 1/A/3305:3307, 1/A/3375:3376 | No text annotation | ||
| IL_9H6I_142 | 1/A/3311:3312, 1/A/3368:3371 | No text annotation | ||
| IL_9H6I_143 | 1/A/3315:3317, 1/A/3360:3365 | No text annotation | ||
| IL_9H6I_144 | 1/A/3319:3324, 1/A/3354:3358 | No text annotation | ||
| IL_9H6I_145 | 1/A/3327:3329, 1/A/3350:3351 | No text annotation | ||
| IL_9H6I_146 | 1/A/3329:3332, 1/A/3347:3350 | No text annotation | ||
| IL_9H6I_147 | 1/C3/15:16, 1/C3/62:64 | Single bulged U | geometric IL_2PJP_001 IL_97561.5 | |
| IL_9H6I_148 | 1/C3/20:27, 1/C3/52:58 | No text annotation | ||
| IL_9H6I_149 | 1/C3/28:29, 1/C3/48:51 | Major groove minor groove platform; mini C-loop | homologous IL_4V9F_103 IL_73108.2 | |
| IL_9H6I_150 | 1/C3/32:36, 1/C3/41:45 | Symmetric double minor groove platform | homologous IL_4V9F_104 IL_58103.12 | |
| IL_9H6I_151 | 1/C3/70:78, 1/C3/98:105 | No text annotation | ||
| IL_9H6I_152 | 1/C3/79:81, 1/C3/95:97 | Isolated non-canonical cWW pair | homologous IL_7A0S_107 IL_71625.3 | |
| IL_9H6I_153 | 1/C3/83:85, 1/C3/92:93 | Single bulged U | homologous IL_4V9F_107 IL_97561.5 | |
| IL_9H6I_154 | 1/W2/4:6, 1/W2/67:69 | No text annotation | homologous IL_7VNV_001 NA | |
| IL_9H6I_155 | 1/h1/24:26, 1/h1/602:603 | No text annotation | ||
| IL_9H6I_156 | 1/h1/35:37, 1/h1/473:475 | No text annotation | ||
| IL_9H6I_157 | 1/h1/37:41, 1/h1/468:473 | No text annotation | ||
| IL_9H6I_158 | 1/h1/42:48, 1/h1/433:435 | No text annotation | ||
| IL_9H6I_159 | 1/h1/50:52, 1/h1/430:431 | No text annotation | ||
| IL_9H6I_160 | 1/h1/58:63, 1/h1/88:90 | No text annotation | ||
| IL_9H6I_161 | 1/h1/64:69, 1/h1/83:87 | No text annotation | ||
| IL_9H6I_162 | 1/h1/110:113, 1/h1/304:307 | No text annotation | ||
| IL_9H6I_163 | 1/h1/114:117, 1/h1/302:303 | No text annotation | ||
| IL_9H6I_164 | 1/h1/118:123, 1/h1/297:301 | No text annotation | ||
| IL_9H6I_165 | 1/h1/141:147, 1/h1/163:170 | No text annotation | ||
| IL_9H6I_166 | 1/h1/147:150, 1/h1/160:163 | No text annotation | ||
| IL_9H6I_167 | 1/h1/184:187, 1/h1/193:196 | No text annotation | ||
| IL_9H6I_168 | 1/h1/201:202, 1/h1/262:264 | No text annotation | ||
| IL_9H6I_169 | 1/h1/202:203, 1/h1/260:262 | No text annotation | ||
| IL_9H6I_170 | 1/h1/203:205, 1/h1/258:260 | No text annotation | ||
| IL_9H6I_171 | 1/h1/266:268, 1/h1/290:291 | No text annotation | ||
| IL_9H6I_172 | 1/h1/271:274, 1/h1/285:287 | No text annotation | ||
| IL_9H6I_173 | 1/h1/313:318, 1/h1/350:357 | No text annotation | ||
| IL_9H6I_174 | 1/h1/320:325, 1/h1/347:348 | No text annotation | ||
| IL_9H6I_175 | 1/h1/365:367, 1/h1/378:383 | No text annotation | ||
| IL_9H6I_176 | 1/h1/391:393, 1/h1/408:410 | No text annotation | ||
| IL_9H6I_177 | 1/h1/413:415, 1/h1/422:424 | No text annotation | ||
| IL_9H6I_178 | 1/h1/441:443, 1/h1/465:466 | No text annotation | ||
| IL_9H6I_179 | 1/h1/445:450, 1/h1/460:463 | No text annotation | ||
| IL_9H6I_181 | 1/h1/516:518, 1/h1/538:545 | No text annotation | ||
| IL_9H6I_182 | 1/h1/519:520, 1/h1/535:537 | No text annotation | ||
| IL_9H6I_183 | 1/h1/520:522, 1/h1/534:535 | No text annotation | ||
| IL_9H6I_184 | 1/h1/552:559, 1/h1/589:590 | No text annotation | ||
| IL_9H6I_185 | 1/h1/559:561, 1/h1/588:589 | No text annotation | ||
| IL_9H6I_186 | 1/h1/564:570, 1/h1/577:585 | No text annotation | ||
| IL_9H6I_187 | 1/h1/616:618, 1/h1/1106:1108 | No text annotation | ||
| IL_9H6I_188 | 1/h1/618:624, 1/h1/1105:1106 | No text annotation | ||
| IL_9H6I_189 | 1/h1/626:628, 1/h1/974:976 | No text annotation | ||
| IL_9H6I_190 | 1/h1/629:633, 1/h1/969:973 | No text annotation | ||
| IL_9H6I_191 | 1/h1/749:750, 1/h1/805:808 | No text annotation | ||
| IL_9H6I_192 | 1/h1/751:753, 1/h1/802:804 | No text annotation | ||
| IL_9H6I_193 | 1/h1/754:762, 1/h1/794:801 | No text annotation | ||
| IL_9H6I_196 | 1/h1/866:867, 1/h1/963:966 | No text annotation | ||
| IL_9H6I_197 | 1/h1/869:871, 1/h1/958:961 | No text annotation | ||
| IL_9H6I_198 | 1/h1/872:875, 1/h1/954:957 | No text annotation | ||
| IL_9H6I_199 | 1/h1/875:879, 1/h1/951:954 | No text annotation | ||
| IL_9H6I_200 | 1/h1/886:889, 1/h1/925:928 | No text annotation | ||
| IL_9H6I_201 | 1/h1/896:900, 1/h1/911:918 | No text annotation | ||
| IL_9H6I_202 | 1/h1/986:991, 1/h1/1015:1017 | No text annotation | ||
| IL_9H6I_203 | 1/h1/991:995, 1/h1/1011:1015 | No text annotation | ||
| IL_9H6I_204 | 1/h1/1035:1037, 1/h1/1096:1102 | No text annotation | ||
| IL_9H6I_205 | 1/h1/1042:1045, 1/h1/1075:1078 | No text annotation | ||
| IL_9H6I_206 | 1/h1/1052:1054, 1/h1/1067:1068 | No text annotation | ||
| IL_9H6I_207 | 1/h1/1056:1058, 1/h1/1064:1065 | No text annotation | ||
| IL_9H6I_208 | 1/h1/1112:1119, 1/h1/1130:1135 | No text annotation | ||
| IL_9H6I_209 | 1/h1/1147:1148, 1/h1/1632:1634 | No text annotation | ||
| IL_9H6I_210 | 1/h1/1150:1152, 1/h1/1629:1630 | No text annotation | ||
| IL_9H6I_211 | 1/h1/1158:1161, 1/h1/1619:1623 | No text annotation | ||
| IL_9H6I_212 | 1/h1/1174:1176, 1/h1/1467:1469 | No text annotation | ||
| IL_9H6I_213 | 1/h1/1179:1180, 1/h1/1462:1464 | No text annotation | ||
| IL_9H6I_214 | 1/h1/1214:1216, 1/h1/1451:1453 | No text annotation | ||
| IL_9H6I_215 | 1/h1/1225:1234, 1/h1/1253:1260 | No text annotation | ||
| IL_9H6I_216 | 1/h1/1235:1237, 1/h1/1250:1252 | No text annotation | ||
| IL_9H6I_217 | 1/h1/1269:1271, 1/h1/1443:1444 | No text annotation | ||
| IL_9H6I_218 | 1/h1/1273:1277, 1/h1/1439:1441 | No text annotation | ||
| IL_9H6I_219 | 1/h1/1273:1279, 1/h1/1433:1441 | No text annotation | ||
| IL_9H6I_220 | 1/h1/1277:1279, 1/h1/1433:1439 | No text annotation | ||
| IL_9H6I_221 | 1/h1/1281:1282, 1/h1/1429:1431 | No text annotation | ||
| IL_9H6I_222 | 1/h1/1291:1293, 1/h1/1324:1326 | No text annotation | ||
| IL_9H6I_223 | 1/h1/1307:1309, 1/h1/1318:1319 | No text annotation | ||
| IL_9H6I_224 | 1/h1/1340:1343, 1/h1/1386:1388 | No text annotation | ||
| IL_9H6I_225 | 1/h1/1346:1349, 1/h1/1380:1383 | No text annotation | ||
| IL_9H6I_226 | 1/h1/1352:1354, 1/h1/1373:1377 | No text annotation | ||
| IL_9H6I_227 | 1/h1/1392:1395, 1/h1/1409:1415 | No text annotation | ||
| IL_9H6I_228 | 1/h1/1480:1482, 1/h1/1530:1532 | No text annotation | ||
| IL_9H6I_229 | 1/h1/1482:1490, 1/h1/1522:1530 | No text annotation | ||
| IL_9H6I_230 | 1/h1/1499:1501, 1/h1/1512:1514 | No text annotation | ||
| IL_9H6I_231 | 1/h1/1542:1547, 1/h1/1568:1573 | No text annotation | ||
| IL_9H6I_232 | 1/h1/1638:1640, 1/h1/1768:1771 | No text annotation | ||
| IL_9H6I_233 | 1/h1/1640:1643, 1/h1/1764:1768 | No text annotation | ||
| IL_9H6I_234 | 1/h1/1644:1646, 1/h1/1761:1763 | No text annotation | ||
| IL_9H6I_235 | 1/h1/1646:1648, 1/h1/1758:1761 | No text annotation | ||
| IL_9H6I_236 | 1/h1/1652:1654, 1/h1/1752:1754 | No text annotation | ||
| IL_9H6I_237 | 1/h1/1655:1658, 1/h1/1748:1751 | No text annotation | ||
| IL_9H6I_238 | 1/h1/1658:1660, 1/h1/1747:1748 | No text annotation | ||
| IL_9H6I_239 | 1/h1/1666:1669, 1/h1/1738:1741 | No text annotation | ||
| IL_9H6I_240 | 1/h1/1671:1674, 1/h1/1733:1736 | No text annotation | ||
| IL_9H6I_241 | 1/h1/1677:1680, 1/h1/1727:1730 | No text annotation | ||
| IL_9H6I_242 | 1/h1/1680:1684, 1/h1/1723:1727 | No text annotation |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_9H6I_023 | No text annotation | ||
| IL_9H6I_054 | No text annotation | ||
| IL_9H6I_107 | No text annotation | ||
| IL_9H6I_108 | No text annotation | ||
| IL_9H6I_180 | No text annotation | ||
| IL_9H6I_194 | No text annotation | ||
| IL_9H6I_195 | No text annotation |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J3_9H6I_001 | 1/3/23:24, 1/A/366:373, 1/A/400:401 | No text annotation | ||
| J3_9H6I_002 | 1/3/23:24, 1/A/366:376, 1/A/387:401 | No text annotation | ||
| J3_9H6I_003 | 1/3/25:28, 1/A/337:353, 1/A/360:365 | No text annotation | ||
| J3_9H6I_004 | 1/3/48:49, 1/3/62:68, 1/3/100:104 | No text annotation | ||
| J3_9H6I_005 | 1/A/111:121, 1/A/147:156, 1/A/260:264 | No text annotation | ||
| J3_9H6I_006 | 1/A/111:122, 1/A/142:156, 1/A/260:264 | No text annotation | ||
| J3_9H6I_007 | 1/A/181:186, 1/A/202:211, 1/A/223:229 | No text annotation | ||
| J3_9H6I_008 | 1/A/433:440, 1/A/495:497, 1/A/629:634 | No text annotation | ||
| J3_9H6I_009 | 1/A/436:440, 1/A/495:497, 1/A/629:633 | No text annotation | ||
| J3_9H6I_010 | 1/A/505:507, 1/A/569:579, 1/A/616:621 | No text annotation | ||
| J3_9H6I_011 | 1/A/585:586, 1/A/595:596, 1/A/608:610 | No text annotation | ||
| J3_9H6I_012 | 1/A/823:829, 1/A/914:916, 1/A/932:935 | No text annotation | ||
| J3_9H6I_013 | 1/A/838:840, 1/A/872:876, 1/A/901:904 | No text annotation | ||
| J3_9H6I_014 | 1/A/997:998, 1/A/1072:1076, 1/A/1102:1107 | No text annotation | ||
| J3_9H6I_015 | 1/A/1488:1494, 1/A/1859:1861, 1/A/1873:1876 | No text annotation | ||
| J3_9H6I_016 | 1/A/1497:1500, 1/A/1839:1845, 1/A/1854:1856 | No text annotation | ||
| J3_9H6I_017 | 1/A/1535:1540, 1/A/1592:1596, 1/A/1613:1614 | No text annotation | ||
| J3_9H6I_018 | 1/A/1547:1549, 1/A/1565:1569, 1/A/1579:1583 | No text annotation | ||
| J3_9H6I_019 | 1/A/1631:1632, 1/A/1641:1645, 1/A/1812:1813 | No text annotation | ||
| J3_9H6I_020 | 1/A/1654:1658, 1/A/1793:1794, 1/A/1798:1803 | No text annotation | ||
| J3_9H6I_021 | 1/A/2429:2433, 1/A/2510:2514, 1/A/2590:2597 | No text annotation | ||
| J3_9H6I_022 | 1/A/2650:2652, 1/A/2753:2764, 1/A/2792:2797 | No text annotation | ||
| J3_9H6I_023 | 1/A/2663:2665, 1/A/2689:2691, 1/A/2700:2705 | No text annotation | ||
| J3_9H6I_024 | 1/A/2885:2888, 1/A/2913:2915, 1/A/2929:2935 | No text annotation | ||
| J3_9H6I_025 | 1/A/3163:3170, 1/A/3200:3211, 1/A/3249:3268 | No text annotation | ||
| J3_9H6I_026 | 1/A/3285:3287, 1/A/3301:3305, 1/A/3376:3379 | No text annotation | ||
| J3_9H6I_027 | 1/C3/9:14, 1/C3/65:66, 1/C3/109:110 | No text annotation | geometric J3_8OI5_025 J3_26985.1 | |
| J3_9H6I_028 | 1/h1/41:42, 1/h1/435:441, 1/h1/466:468 | No text annotation | ||
| J3_9H6I_029 | 1/h1/41:48, 1/h1/433:441, 1/h1/466:468 | No text annotation | ||
| J3_9H6I_030 | 1/h1/635:637, 1/h1/862:866, 1/h1/966:967 | No text annotation | ||
| J3_9H6I_031 | 1/h1/635:637, 1/h1/862:867, 1/h1/963:967 | No text annotation | ||
| J3_9H6I_032 | 1/h1/763:766, 1/h1/776:778, 1/h1/787:793 | No text annotation | ||
| J3_9H6I_033 | 1/h1/882:885, 1/h1/929:937, 1/h1/944:948 | No text annotation | ||
| J3_9H6I_034 | 1/h1/1038:1040, 1/h1/1080:1084, 1/h1/1091:1095 | No text annotation | ||
| J3_9H6I_035 | 1/h1/1162:1165, 1/h1/1583:1589, 1/h1/1611:1618 | No text annotation | ||
| J3_9H6I_036 | 1/h1/1169:1172, 1/h1/1471:1473, 1/h1/1576:1579 | No text annotation | ||
| J3_9H6I_037 | 1/h1/1181:1188, 1/h1/1199:1210, 1/h1/1457:1461 | No text annotation | ||
| J3_9H6I_038 | 1/h1/1216:1221, 1/h1/1264:1268, 1/h1/1445:1451 | No text annotation | ||
| J3_9H6I_039 | 1/h1/1284:1289, 1/h1/1328:1333, 1/h1/1422:1427 | No text annotation | ||
| J3_9H6I_040 | 1/h1/1294:1295, 1/h1/1304:1307, 1/h1/1319:1323 | No text annotation | ||
| J3_9H6I_041 | 1/h1/1337:1339, 1/h1/1389:1392, 1/h1/1415:1418 | No text annotation | ||
| J3_9H6I_042 | 1/h1/1337:1339, 1/h1/1389:1395, 1/h1/1409:1418 | No text annotation | ||
| J3_9H6I_043 | 1/h1/1473:1477, 1/h1/1535:1542, 1/h1/1573:1576 | No text annotation | ||
| J4_9H6I_001 | 1/2/7:10, 1/2/25:27, 1/2/43:49, 1/2/65:66 | tRNA junction | homologous J4_6UFH_001 J4_95067.1 | |
| J4_9H6I_002 | 1/A/110:111, 1/A/264:269, 1/A/290:296, 1/A/313:316 | No text annotation | ||
| J4_9H6I_003 | 1/A/181:186, 1/A/202:205, 1/A/209:211, 1/A/223:229 | No text annotation | ||
| J4_9H6I_004 | 1/A/1460:1466, 1/A/1484:1485, 1/A/1879:1882, 1/A/2350:2351 | No text annotation | ||
| J4_9H6I_005 | 1/A/1501:1505, 1/A/1529:1534, 1/A/1615:1616, 1/A/1831:1838 | No text annotation | ||
| J4_9H6I_006 | 1/A/1504:1505, 1/A/1529:1534, 1/A/1615:1616, 1/A/1831:1837 | No text annotation | ||
| J4_9H6I_007 | 1/A/1674:1675, 1/A/1693:1694, 1/A/1753:1754, 1/A/1774:1775 | No text annotation | ||
| J4_9H6I_008 | 1/A/2129:2133, 1/A/2145:2149, 1/A/2184:2188, 1/A/2315:2320 | No text annotation | ||
| J4_9H6I_009 | 1/A/2190:2192, 1/A/2246:2247, 1/A/2265:2274, 1/A/2308:2313 | No text annotation | ||
| J4_9H6I_010 | 1/A/2653:2657, 1/A/2711:2713, 1/A/2740:2741, 1/A/2750:2752 | No text annotation | ||
| J4_9H6I_011 | 1/A/2653:2657, 1/A/2711:2715, 1/A/2739:2741, 1/A/2750:2752 | No text annotation | ||
| J4_9H6I_012 | 1/A/3008:3010, 1/A/3040:3041, 1/A/3096:3098, 1/A/3132:3134 | No text annotation | ||
| J4_9H6I_013 | 1/W2/7:10, 1/W2/25:27, 1/W2/43:49, 1/W2/65:66 | tRNA junction | homologous J4_5AXM_001 J4_95067.1 | |
| J4_9H6I_014 | 1/h1/100:108, 1/h1/309:311, 1/h1/359:363, 1/h1/385:386 | No text annotation | ||
| J4_9H6I_015 | 1/h1/624:626, 1/h1/976:981, 1/h1/1022:1033, 1/h1/1104:1105 | No text annotation | ||
| J5_9H6I_001 | 1/3/39:46, 1/3/106:111, 1/3/119:120, 1/3/143:145, 1/A/18:20 | No text annotation | ||
| J5_9H6I_002 | 1/A/670:675, 1/A/808:811, 1/A/950:953, 1/A/1385:1386, 1/A/1440:1446 | No text annotation | ||
| J5_9H6I_003 | 1/A/687:690, 1/A/716:720, 1/A/727:732, 1/A/758:760, 1/A/791:796 | No text annotation | ||
| J5_9H6I_004 | 1/A/1908:1916, 1/A/1940:1941, 1/A/2108:2109, 1/A/2113:2121, 1/A/2329:2331 | No text annotation | ||
| J5_9H6I_005 | 1/A/2397:2404, 1/A/2814:2822, 1/A/2866:2875, 1/A/2950:2956, 1/A/2974:2979 | No text annotation | ||
| J5_9H6I_006 | 1/A/2414:2417, 1/A/2610:2613, 1/A/2626:2627, 1/A/2649:2650, 1/A/2797:2803 | No text annotation | ||
| J5_9H6I_007 | 1/h1/31:35, 1/h1/475:481, 1/h1/511:516, 1/h1/545:548, 1/h1/594:597 | No text annotation | ||
| J5_9H6I_008 | 1/h1/31:35, 1/h1/475:481, 1/h1/511:518, 1/h1/538:548, 1/h1/594:597 | No text annotation | ||
| J5_9H6I_009 | 1/h1/54:57, 1/h1/91:98, 1/h1/388:390, 1/h1/411:413, 1/h1/424:428 | No text annotation | ||
| J5_9H6I_010 | 1/h1/127:140, 1/h1/171:182, 1/h1/198:201, 1/h1/264:266, 1/h1/291:293 | No text annotation | ||
| J5_9H6I_011 | 1/h1/127:140, 1/h1/171:182, 1/h1/198:201, 1/h1/264:268, 1/h1/290:293 | No text annotation | ||
| J6_9H6I_001 | 1/3/36:39, 1/A/20:25, 1/A/56:66, 1/A/73:77, 1/A/104:108, 1/A/318:328 | No text annotation | ||
| J6_9H6I_002 | 1/A/2414:2417, 1/A/2610:2613, 1/A/2626:2627, 1/A/2649:2652, 1/A/2753:2764, 1/A/2792:2803 | No text annotation | ||
| J7_9H6I_001 | 1/A/958:963, 1/A/976:977, 1/A/1123:1126, 1/A/1150:1155, 1/A/1166:1170, 1/A/1348:1349, 1/A/1375:1380 | No text annotation |
Problematic loops
No problematic loops
Coloring options: