IL_9H6I_018
3D structure
- PDB id
- 9H6I (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Arabidopsis thaliana 80S ribosome in complex with P- and E-site tRNAs, mRNA, and thermospermine
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.2 Å
Loop
- Sequence
- GGAC*GAGUCAAAGAGUGC
- Length
- 18 nucleotides
- Bulged bases
- 9H6I|1|A|G|395, 9H6I|1|A|G|399
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9H6I|1|A|G|373
9H6I|1|A|G|374
9H6I|1|A|A|375
9H6I|1|A|C|376
*
9H6I|1|A|G|387
9H6I|1|A|A|388
9H6I|1|A|G|389
9H6I|1|A|U|390
9H6I|1|A|C|391
9H6I|1|A|A|392
9H6I|1|A|A|393
9H6I|1|A|A|394
9H6I|1|A|G|395
9H6I|1|A|A|396
9H6I|1|A|G|397
9H6I|1|A|U|398
9H6I|1|A|G|399
9H6I|1|A|C|400
Current chains
- Chain A
- Ribosomal RNA 25S
Nearby chains
- Chain 3
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain BA
- Large ribosomal subunit protein eL39z/eL39x
- Chain BM
- Large ribosomal subunit protein uL22z
- Chain BO
- Large ribosomal subunit protein uL24z
- Chain L3
- Nascent polypeptide
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