IL_9H6Y_071
3D structure
- PDB id
- 9H6Y (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Late-stage 48S Initiation Complex (LS48S IC) guided by the trans-RNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UGCAUGG*UCUGUGAUG
- Length
- 16 nucleotides
- Bulged bases
- 9H6Y|1|2|C|1327, 9H6Y|1|2|U|1490, 9H6Y|1|2|G|1493
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9H6Y|1|2|U|1325
9H6Y|1|2|G|1326
9H6Y|1|2|C|1327
9H6Y|1|2|A|1328
9H6Y|1|2|U|1329
9H6Y|1|2|G|1330
9H6Y|1|2|G|1331
*
9H6Y|1|2|U|1488
9H6Y|1|2|C|1489
9H6Y|1|2|U|1490
9H6Y|1|2|G|1491
9H6Y|1|2|U|1492
9H6Y|1|2|G|1493
9H6Y|1|2|A|1494
9H6Y|1|2|U|1495
9H6Y|1|2|G|1496
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain F
- Small ribosomal subunit protein uS3
- Chain M
- Small ribosomal subunit protein eS10
- Chain W
- Small ribosomal subunit protein uS10
- Chain e
- Small ribosomal subunit protein uS14
- Chain f
- Ubiquitin-ribosomal protein eS31 fusion protein
- Chain j
- Eukaryotic translation initiation factor 4C
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