IL_9H74_039

3D structure

PDB id

9H74 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Late-stage 48S Initiation Complex with eIF3 (LS48S-eIF3 IC) guided by the trans-RNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CCUCUCGGCG*CCCGAAG

Length

17 nucleotides

Bulged bases

9H74|1|2|G|748

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9H74|1|2|C|741
9H74|1|2|C|742
9H74|1|2|U|743
9H74|1|2|C|744
9H74|1|2|U|745
9H74|1|2|C|746
9H74|1|2|G|747
9H74|1|2|G|748
9H74|1|2|C|749
9H74|1|2|G|750
*
9H74|1|2|C|786
9H74|1|2|C|787
9H74|1|2|C|788
9H74|1|2|G|789
9H74|1|2|A|790
9H74|1|2|A|791
9H74|1|2|G|792

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain G

40S ribosomal protein S4

Chain I

Small ribosomal subunit protein eS6

Chain J

40S ribosomal protein S7

Chain N

40S ribosomal protein S11