IL_9H74_042

3D structure

PDB id

9H74 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Late-stage 48S Initiation Complex with eIF3 (LS48S-eIF3 IC) guided by the trans-RNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GAAAAAAUU*ACCGCAGC

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9H74|1|2|G|803
9H74|1|2|A|804
9H74|1|2|A|805
9H74|1|2|A|806
9H74|1|2|A|807
9H74|1|2|A|808
9H74|1|2|A|809
9H74|1|2|U|810
9H74|1|2|U|811
*
9H74|1|2|A|845
9H74|1|2|C|846
9H74|1|2|C|847
9H74|1|2|G|848
9H74|1|2|C|849
9H74|1|2|A|850
9H74|1|2|G|851
9H74|1|2|C|852

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain G

40S ribosomal protein S4

Chain L

40S ribosomal protein S9

Chain N

40S ribosomal protein S11

Chain Y

Ribosomal protein S15a