IL_9H74_083

3D structure

PDB id

9H74 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Late-stage 48S Initiation Complex with eIF3 (LS48S-eIF3 IC) guided by the trans-RNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GUGCCUACC*GUAACC

Length

15 nucleotides

Bulged bases

9H74|1|2|C|1548, 9H74|1|2|A|1551, 9H74|1|2|A|1575, 9H74|1|2|C|1576

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9H74|1|2|G|1545
9H74|1|2|U|1546
9H74|1|2|G|1547
9H74|1|2|C|1548
9H74|1|2|C|1549
9H74|1|2|U|1550
9H74|1|2|A|1551
9H74|1|2|C|1552
9H74|1|2|C|1553
*
9H74|1|2|G|1572
9H74|1|2|U|1573
9H74|1|2|A|1574
9H74|1|2|A|1575
9H74|1|2|C|1576
9H74|1|2|C|1577

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain F

Ribosomal protein S3

Chain M

Small ribosomal subunit protein eS10

Chain W

40S ribosomal protein uS10

Chain e

40S ribosomal protein S29