IL_9H9I_001
3D structure
- PDB id
- 9H9I (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Complex 2 (HEAD) 30S-IF1-IF3-tRNA-GE81112
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GCA*UUCCC
- Length
- 8 nucleotides
- Bulged bases
- 9H9I|1|1|C|934
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9H9I_001 not in the Motif Atlas
- Geometric match to IL_5J7L_041
- Geometric discrepancy: 0.332
- The information below is about IL_5J7L_041
- Detailed Annotation
- Minor groove platform
- Broad Annotation
- No text annotation
- Motif group
- IL_47078.3
- Basepair signature
- cWW-cWS-L-cWW-L
- Number of instances in this motif group
- 4
Unit IDs
9H9I|1|1|G|933
9H9I|1|1|C|934
9H9I|1|1|A|935
*
9H9I|1|1|U|1380
9H9I|1|1|U|1381
9H9I|1|1|C|1382
9H9I|1|1|C|1383
9H9I|1|1|C|1384
Current chains
- Chain 1
- 16S RNA (head domain)
Nearby chains
- Chain 3
- Transfer RNA; tRNA
- Chain G
- Small ribosomal subunit protein uS7
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