IL_9HA3_014
3D structure
- PDB id
- 9HA3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pooled 50S subunit C_(L22)-~H61 precursor states supplemented with Api137
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.62 Å
Loop
- Sequence
- UUAAC*GGGAG
- Length
- 10 nucleotides
- Bulged bases
- 9HA3|1|A|G|620
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9HA3_014 not in the Motif Atlas
- Homologous match to IL_5J7L_258
- Geometric discrepancy: 0.2957
- The information below is about IL_5J7L_258
- Detailed Annotation
- AAA cross-strand stack
- Broad Annotation
- AAA cross-strand stack
- Motif group
- IL_66798.2
- Basepair signature
- cWW-L-R-L-R-tHS-cWW
- Number of instances in this motif group
- 6
Unit IDs
9HA3|1|A|U|606
9HA3|1|A|U|607
9HA3|1|A|A|608
9HA3|1|A|A|609
9HA3|1|A|C|610
*
9HA3|1|A|G|618
9HA3|1|A|G|619
9HA3|1|A|G|620
9HA3|1|A|A|621
9HA3|1|A|G|622
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain E
- Large ribosomal subunit protein uL4
- Chain L
- Large ribosomal subunit protein uL15
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