IL_9HA3_045

3D structure

PDB id

9HA3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pooled 50S subunit C_(L22)-~H61 precursor states supplemented with Api137

Experimental method

ELECTRON MICROSCOPY

Resolution

3.62 Å

Loop

Sequence

UGUAG*UGAGG

Length

10 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9HA3_045 not in the Motif Atlas

Homologous match to IL_5J7L_300

Geometric discrepancy: 0.28

The information below is about IL_5J7L_300

Detailed Annotation

tSH-tHW-tHS

Broad Annotation

No text annotation

Motif group

IL_38862.4

Basepair signature

cWW-cSH-R-tWH-tHS-cWW

Number of instances in this motif group

5

Unit IDs

9HA3|1|A|U|1474
9HA3|1|A|G|1475
9HA3|1|A|U|1476
9HA3|1|A|A|1477
9HA3|1|A|G|1478
*
9HA3|1|A|U|1513
9HA3|1|A|G|1514
9HA3|1|A|A|1515
9HA3|1|A|G|1516
9HA3|1|A|G|1517

Current chains

Chain A

23S ribosomal RNA

Nearby chains