IL_9HA4_029

3D structure

PDB id

9HA4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pooled 50S subunit C-CP_(L22)- precursor states supplemented with Api137

Experimental method

ELECTRON MICROSCOPY

Resolution

4.26 Å

Loop

Sequence

UUAAGUGGGAAAC*GGAAGAUGUAACGGGGCUAAA

Length

34 nucleotides

Bulged bases

9HA4|1|A|U|1130

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9HA4|1|A|U|1018
9HA4|1|A|U|1019
9HA4|1|A|A|1020
9HA4|1|A|A|1021
9HA4|1|A|G|1022
9HA4|1|A|U|1023
9HA4|1|A|G|1024
9HA4|1|A|G|1025
9HA4|1|A|G|1026
9HA4|1|A|A|1027
9HA4|1|A|A|1028
9HA4|1|A|A|1029
9HA4|1|A|C|1030
*
9HA4|1|A|G|1124
9HA4|1|A|G|1125
9HA4|1|A|A|1126
9HA4|1|A|A|1127
9HA4|1|A|G|1128
9HA4|1|A|A|1129
9HA4|1|A|U|1130
9HA4|1|A|G|1131
9HA4|1|A|U|1132
9HA4|1|A|A|1133
9HA4|1|A|A|1134
9HA4|1|A|C|1135
9HA4|1|A|G|1136
9HA4|1|A|G|1137
9HA4|1|A|G|1138
9HA4|1|A|G|1139
9HA4|1|A|C|1140
9HA4|1|A|U|1141
9HA4|1|A|A|1142
9HA4|1|A|A|1143
9HA4|1|A|A|1144

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain J

Large ribosomal subunit protein uL13