3D structure

PDB id
9HA4 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Pooled 50S subunit C-CP_(L22)- precursor states supplemented with Api137
Experimental method
ELECTRON MICROSCOPY
Resolution
4.26 Å

Loop

Sequence
UGC*GCAUCAG
Length
10 nucleotides
Bulged bases
9HA4|1|A|G|1416
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9HA4|1|A|U|1415
9HA4|1|A|G|1416
9HA4|1|A|C|1417
*
9HA4|1|A|G|1581
9HA4|1|A|C|1582
9HA4|1|A|A|1583
9HA4|1|A|U|1584
9HA4|1|A|C|1585
9HA4|1|A|A|1586
9HA4|1|A|G|1587

Current chains

Chain A
23S ribosomal RNA

Nearby chains

No other chains within 10Å

Coloring options:

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