IL_9HA6_077
3D structure
- PDB id
- 9HA6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- mature 50S subunit supplemented with Api137
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.08 Å
Loop
- Sequence
- CAA*UG
- Length
- 5 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9HA6_077 not in the Motif Atlas
- Homologous match to IL_5J7L_320
- Geometric discrepancy: 0.1185
- The information below is about IL_5J7L_320
- Detailed Annotation
- Major groove platform
- Broad Annotation
- No text annotation
- Motif group
- IL_48076.6
- Basepair signature
- cWW-cSH-cWW
- Number of instances in this motif group
- 41
Unit IDs
9HA6|1|A|C|2050
9HA6|1|A|A|2051
9HA6|1|A|A|2052
*
9HA6|1|A|U|2617
9HA6|1|A|G|2618
Current chains
- Chain A
- 23S ribosomal rRNA
Nearby chains
- Chain 0
- Large ribosomal subunit protein bL32
- Chain D
- 50S ribosomal protein L3
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