IL_9HA6_084

3D structure

PDB id

9HA6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

mature 50S subunit supplemented with Api137

Experimental method

ELECTRON MICROSCOPY

Resolution

3.08 Å

Loop

Sequence

CUUGAUGUGUAGGAUAGGUGG*CCACCCUUUAAUG

Length

34 nucleotides

Bulged bases

9HA6|1|A|U|2111, 9HA6|1|A|G|2112, 9HA6|1|A|U|2118

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9HA6|1|A|C|2104
9HA6|1|A|U|2105
9HA6|1|A|U|2106
9HA6|1|A|G|2107
9HA6|1|A|A|2108
9HA6|1|A|U|2109
9HA6|1|A|G|2110
9HA6|1|A|U|2111
9HA6|1|A|G|2112
9HA6|1|A|U|2113
9HA6|1|A|A|2114
9HA6|1|A|G|2115
9HA6|1|A|G|2116
9HA6|1|A|A|2117
9HA6|1|A|U|2118
9HA6|1|A|A|2119
9HA6|1|A|G|2120
9HA6|1|A|G|2121
9HA6|1|A|U|2122
9HA6|1|A|G|2123
9HA6|1|A|G|2124
*
9HA6|1|A|C|2174
9HA6|1|A|C|2175
9HA6|1|A|A|2176
9HA6|1|A|C|2177
9HA6|1|A|C|2178
9HA6|1|A|C|2179
9HA6|1|A|U|2180
9HA6|1|A|U|2181
9HA6|1|A|U|2182
9HA6|1|A|A|2183
9HA6|1|A|A|2184
9HA6|1|A|U|2185
9HA6|1|A|G|2186

Current chains

Chain A

23S ribosomal rRNA

Nearby chains