IL_9HA6_105
3D structure
- PDB id
- 9HA6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- mature 50S subunit supplemented with Api137
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.08 Å
Loop
- Sequence
- CU*AAG
- Length
- 5 nucleotides
- Bulged bases
- 9HA6|1|A|A|2800
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9HA6_105 not in the Motif Atlas
- Geometric match to IL_5J7L_261
- Geometric discrepancy: 0.2523
- The information below is about IL_5J7L_261
- Detailed Annotation
- Single bulged A
- Broad Annotation
- No text annotation
- Motif group
- IL_31462.7
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 132
Unit IDs
9HA6|1|A|C|2795
9HA6|1|A|U|2796
*
9HA6|1|A|A|2799
9HA6|1|A|A|2800
9HA6|1|A|G|2801
Current chains
- Chain A
- 23S ribosomal rRNA
Nearby chains
No other chains within 10ÅColoring options: