IL_9HA7_033

3D structure

PDB id

9HA7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pooled 50S subunit C-CP_(L22)-~H61 precursor states supplemented with Api137

Experimental method

ELECTRON MICROSCOPY

Resolution

4.37 Å

Loop

Sequence

CCAAC*GGG

Length

8 nucleotides

Bulged bases

9HA7|1|A|G|1332

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9HA7_033 not in the Motif Atlas

Homologous match to IL_5J7L_291

Geometric discrepancy: 0.4162

The information below is about IL_5J7L_291

Detailed Annotation

C-loop

Broad Annotation

No text annotation

Motif group

IL_63596.11

Basepair signature

cWW-cWS-cSH-tWH-cWW-L

Number of instances in this motif group

19

Unit IDs

9HA7|1|A|C|1319
9HA7|1|A|C|1320
9HA7|1|A|A|1321
9HA7|1|A|A|1322
9HA7|1|A|C|1323
*
9HA7|1|A|G|1331
9HA7|1|A|G|1332
9HA7|1|A|G|1333

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain y

Apidaecins type 22