IL_9HAL_009

3D structure

PDB id

9HAL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pooled 50S subunit d126_(L29)-/(L22)- precursor states supplemented with Api137

Experimental method

ELECTRON MICROSCOPY

Resolution

4.49 Å

Loop

Sequence

CCUGAAUC*GUGAG

Length

13 nucleotides

Bulged bases

9HAL|1|A|G|277

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9HAL_009 not in the Motif Atlas

Homologous match to IL_5J7L_253

Geometric discrepancy: 0.361

The information below is about IL_5J7L_253

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_77870.1

Basepair signature

cWW-L-R-L-tHS-L-cWW-L-cWW

Number of instances in this motif group

2

Unit IDs

9HAL|1|A|C|274
9HAL|1|A|C|275
9HAL|1|A|U|276
9HAL|1|A|G|277
9HAL|1|A|A|278
9HAL|1|A|A|279
9HAL|1|A|U|280
9HAL|1|A|C|281
*
9HAL|1|A|G|359
9HAL|1|A|U|360
9HAL|1|A|G|361
9HAL|1|A|A|362
9HAL|1|A|G|363

Current chains

Chain A

23S ribosomal RNA

Nearby chains