IL_9HAL_020

3D structure

PDB id

9HAL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pooled 50S subunit d126_(L29)-/(L22)- precursor states supplemented with Api137

Experimental method

ELECTRON MICROSCOPY

Resolution

4.49 Å

Loop

Sequence

AAUUC*GUUAU

Length

10 nucleotides

Bulged bases

9HAL|1|A|U|846, 9HAL|1|A|U|931

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9HAL_020 not in the Motif Atlas

Geometric match to IL_5J7L_399

Geometric discrepancy: 0.3409

The information below is about IL_5J7L_399

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_96236.1

Basepair signature

cWW-tWW-cWW-L-cWW

Number of instances in this motif group

1

Unit IDs

9HAL|1|A|A|844
9HAL|1|A|A|845
9HAL|1|A|U|846
9HAL|1|A|U|847
9HAL|1|A|C|848
*
9HAL|1|A|G|930
9HAL|1|A|U|931
9HAL|1|A|U|932
9HAL|1|A|A|933
9HAL|1|A|U|934

Current chains

Chain A

23S ribosomal RNA

Nearby chains