IL_9HAL_032

3D structure

PDB id

9HAL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pooled 50S subunit d126_(L29)-/(L22)- precursor states supplemented with Api137

Experimental method

ELECTRON MICROSCOPY

Resolution

4.49 Å

Loop

Sequence

GUAAG*UAUC

Length

9 nucleotides

Bulged bases

9HAL|1|A|A|1205

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9HAL_032 not in the Motif Atlas

Homologous match to IL_5J7L_287

Geometric discrepancy: 0.2364

The information below is about IL_5J7L_287

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_91920.1

Basepair signature

cWW-cWW-tHH-cWW

Number of instances in this motif group

1

Unit IDs

9HAL|1|A|G|1202
9HAL|1|A|U|1203
9HAL|1|A|A|1204
9HAL|1|A|A|1205
9HAL|1|A|G|1206
*
9HAL|1|A|U|1240
9HAL|1|A|A|1241
9HAL|1|A|U|1242
9HAL|1|A|C|1243

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain E

Large ribosomal subunit protein uL4

Chain L

Large ribosomal subunit protein uL15