IL_9HAM_028

3D structure

PDB id

9HAM (explore in PDB, NAKB, or RNA 3D Hub)

Description

C_(L29)-/(L22)- precursor supplemented with Api137

Experimental method

ELECTRON MICROSCOPY

Resolution

5.06 Å

Loop

Sequence

UUAAGUGGGAAAC*GGAAGAUGUAACGGGGCUAAA

Length

34 nucleotides

Bulged bases

9HAM|1|A|U|1130, 9HAM|1|A|G|1131

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9HAM|1|A|U|1018
9HAM|1|A|U|1019
9HAM|1|A|A|1020
9HAM|1|A|A|1021
9HAM|1|A|G|1022
9HAM|1|A|U|1023
9HAM|1|A|G|1024
9HAM|1|A|G|1025
9HAM|1|A|G|1026
9HAM|1|A|A|1027
9HAM|1|A|A|1028
9HAM|1|A|A|1029
9HAM|1|A|C|1030
*
9HAM|1|A|G|1124
9HAM|1|A|G|1125
9HAM|1|A|A|1126
9HAM|1|A|A|1127
9HAM|1|A|G|1128
9HAM|1|A|A|1129
9HAM|1|A|U|1130
9HAM|1|A|G|1131
9HAM|1|A|U|1132
9HAM|1|A|A|1133
9HAM|1|A|A|1134
9HAM|1|A|C|1135
9HAM|1|A|G|1136
9HAM|1|A|G|1137
9HAM|1|A|G|1138
9HAM|1|A|G|1139
9HAM|1|A|C|1140
9HAM|1|A|U|1141
9HAM|1|A|A|1142
9HAM|1|A|A|1143
9HAM|1|A|A|1144

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain J

Large ribosomal subunit protein uL13