IL_9HLZ_005

3D structure

PDB id

9HLZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Translational activators Aep1, Aep2 and Atp25 in complex with mRNA and the yeast mitochondrial ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UUACUAAUA*UUAAAA

Length

15 nucleotides

Bulged bases

9HLZ|1|AA|C|116, 9HLZ|1|AA|A|119

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9HLZ|1|AA|U|113
9HLZ|1|AA|U|114
9HLZ|1|AA|A|115
9HLZ|1|AA|C|116
9HLZ|1|AA|U|117
9HLZ|1|AA|A|118
9HLZ|1|AA|A|119
9HLZ|1|AA|U|120
9HLZ|1|AA|A|121
*
9HLZ|1|AA|U|140
9HLZ|1|AA|U|141
9HLZ|1|AA|A|142
9HLZ|1|AA|A|143
9HLZ|1|AA|A|144
9HLZ|1|AA|A|145

Current chains

Chain AA

21S mitochondrial rRNA

Nearby chains

Chain 33

Large ribosomal subunit protein mL41

Chain PP

Large ribosomal subunit protein uL23m

Chain QQ

Large ribosomal subunit protein uL24m

Chain TT

Large ribosomal subunit protein uL29m

Chain YY

Large ribosomal subunit protein bL34m