IL_9HLZ_027

3D structure

PDB id

9HLZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Translational activators Aep1, Aep2 and Atp25 in complex with mRNA and the yeast mitochondrial ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

AC*GUU

Length

5 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9HLZ_027 not in the Motif Atlas

Geometric match to IL_8OI5_038

Geometric discrepancy: 0.295

The information below is about IL_8OI5_038

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_15011.2

Basepair signature

cWW-L-cWW

Number of instances in this motif group

54

Unit IDs

9HLZ|1|AA|A|808
9HLZ|1|AA|C|809
*
9HLZ|1|AA|G|817
9HLZ|1|AA|U|818
9HLZ|1|AA|U|819

Current chains

Chain AA

21S mitochondrial rRNA

Nearby chains