IL_9HLZ_036

3D structure

PDB id

9HLZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Translational activators Aep1, Aep2 and Atp25 in complex with mRNA and the yeast mitochondrial ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GUACGGCC*GAUAAUC

Length

15 nucleotides

Bulged bases

9HLZ|1|AA|A|1357, 9HLZ|1|AA|C|1358, 9HLZ|1|AA|U|1408

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9HLZ|1|AA|G|1355
9HLZ|1|AA|U|1356
9HLZ|1|AA|A|1357
9HLZ|1|AA|C|1358
9HLZ|1|AA|G|1359
9HLZ|1|AA|G|1360
9HLZ|1|AA|C|1361
9HLZ|1|AA|C|1362
*
9HLZ|1|AA|G|1403
9HLZ|1|AA|A|1404
9HLZ|1|AA|U|1405
9HLZ|1|AA|A|1406
9HLZ|1|AA|A|1407
9HLZ|1|AA|U|1408
9HLZ|1|AA|C|1409

Current chains

Chain AA

21S mitochondrial rRNA

Nearby chains

Chain 33

Large ribosomal subunit protein mL41

Chain PP

Large ribosomal subunit protein uL23m

Chain dd

Large ribosomal subunit protein mL67