IL_9HLZ_058

3D structure

PDB id

9HLZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Translational activators Aep1, Aep2 and Atp25 in complex with mRNA and the yeast mitochondrial ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

AUAUAAAUAA*UAAUUAAAU

Length

19 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9HLZ|1|AA|A|1757
9HLZ|1|AA|U|1758
9HLZ|1|AA|A|1759
9HLZ|1|AA|U|1760
9HLZ|1|AA|A|1761
9HLZ|1|AA|A|1762
9HLZ|1|AA|A|1763
9HLZ|1|AA|U|1764
9HLZ|1|AA|A|1765
9HLZ|1|AA|A|1766
*
9HLZ|1|AA|U|1785
9HLZ|1|AA|A|1786
9HLZ|1|AA|A|1787
9HLZ|1|AA|U|1788
9HLZ|1|AA|U|1789
9HLZ|1|AA|A|1790
9HLZ|1|AA|A|1791
9HLZ|1|AA|A|1792
9HLZ|1|AA|U|1793

Current chains

Chain AA

21S mitochondrial rRNA

Nearby chains

Chain BB

Large ribosomal subunit protein uL2m

Chain GG

Large ribosomal subunit protein bL9m

Chain r

Small subunit ribosomal RNA; SSU rRNA

Chain t

Transfer RNA; tRNA