IL_9HLZ_072
3D structure
- PDB id
- 9HLZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Translational activators Aep1, Aep2 and Atp25 in complex with mRNA and the yeast mitochondrial ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- UAAC*GAAA
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9HLZ_072 not in the Motif Atlas
- Homologous match to IL_7A0S_081
- Geometric discrepancy: 0.3235
- The information below is about IL_7A0S_081
- Detailed Annotation
- Double sheared
- Broad Annotation
- Double sheared
- Motif group
- IL_58355.2
- Basepair signature
- cWW-tSH-tHS-cWW
- Number of instances in this motif group
- 43
Unit IDs
9HLZ|1|AA|U|2617
9HLZ|1|AA|A|2618
9HLZ|1|AA|A|2619
9HLZ|1|AA|C|2620
*
9HLZ|1|AA|G|2631
9HLZ|1|AA|A|2632
9HLZ|1|AA|A|2633
9HLZ|1|AA|A|2634
Current chains
- Chain AA
- 21S mitochondrial rRNA
Nearby chains
- Chain 11
- Large ribosomal subunit protein mL38
- Chain EE
- Large ribosomal subunit protein uL5m
- Chain RR
- Large ribosomal subunit protein bL27m
- Chain ZZ
- Large ribosomal subunit protein bL35m
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