IL_9HLZ_091

3D structure

PDB id

9HLZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Translational activators Aep1, Aep2 and Atp25 in complex with mRNA and the yeast mitochondrial ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GG*UAC

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9HLZ_091 not in the Motif Atlas

Geometric match to IL_9E6Q_101

Geometric discrepancy: 0.0917

The information below is about IL_9E6Q_101

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_77710.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

26

Unit IDs

9HLZ|1|AA|G|3158
9HLZ|1|AA|G|3159
*
9HLZ|1|AA|U|3246
9HLZ|1|AA|A|3247
9HLZ|1|AA|C|3248

Current chains

Chain AA

21S mitochondrial rRNA

Nearby chains

Chain LL

Large ribosomal subunit protein bL17m

Chain MM

Large ribosomal subunit protein bL19m