IL_9HLZ_113
3D structure
- PDB id
- 9HLZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Translational activators Aep1, Aep2 and Atp25 in complex with mRNA and the yeast mitochondrial ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- UUAAA*UAUUAA
- Length
- 11 nucleotides
- Bulged bases
- 9HLZ|1|r|U|531
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9HLZ_113 not in the Motif Atlas
- Geometric match to IL_8B0X_021
- Geometric discrepancy: 0.2912
- The information below is about IL_8B0X_021
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_82100.1
- Basepair signature
- cWW-tWW-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 3
Unit IDs
9HLZ|1|r|U|517
9HLZ|1|r|U|518
9HLZ|1|r|A|519
9HLZ|1|r|A|520
9HLZ|1|r|A|521
*
9HLZ|1|r|U|529
9HLZ|1|r|A|530
9HLZ|1|r|U|531
9HLZ|1|r|U|532
9HLZ|1|r|A|533
9HLZ|1|r|A|534
Current chains
- Chain r
- 15S mitochondrial rRNA
Nearby chains
- Chain 2
- Small ribosomal subunit protein mS41
- Chain 6
- Small ribosomal subunit protein mS45
- Chain D
- Small ribosomal subunit protein uS4m
- Chain P
- Small ribosomal subunit protein bS16m
Coloring options: