IL_9HLZ_125

3D structure

PDB id

9HLZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Translational activators Aep1, Aep2 and Atp25 in complex with mRNA and the yeast mitochondrial ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

AAGAGUACG*UGAAACU

Length

16 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9HLZ|1|r|A|951
9HLZ|1|r|A|952
9HLZ|1|r|G|953
9HLZ|1|r|A|954
9HLZ|1|r|G|955
9HLZ|1|r|U|956
9HLZ|1|r|A|957
9HLZ|1|r|C|958
9HLZ|1|r|G|959
*
9HLZ|1|r|U|970
9HLZ|1|r|G|971
9HLZ|1|r|A|972
9HLZ|1|r|A|973
9HLZ|1|r|A|974
9HLZ|1|r|C|975
9HLZ|1|r|U|976

Current chains

Chain r

15S mitochondrial rRNA

Nearby chains

Chain 1

Small ribosomal subunit protein mS38

Chain L

Small ribosomal subunit protein uS12m