IL_9HLZ_130

3D structure

PDB id

9HLZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Translational activators Aep1, Aep2 and Atp25 in complex with mRNA and the yeast mitochondrial ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GCG*UC

Length

5 nucleotides

Bulged bases

9HLZ|1|r|C|1096

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9HLZ_130 not in the Motif Atlas

Homologous match to IL_6CZR_152

Geometric discrepancy: 0.1222

The information below is about IL_6CZR_152

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9HLZ|1|r|G|1095
9HLZ|1|r|C|1096
9HLZ|1|r|G|1097
*
9HLZ|1|r|U|1240
9HLZ|1|r|C|1241

Current chains

Chain r

15S mitochondrial rRNA

Nearby chains

Chain N

Small ribosomal subunit protein uS14m

Chain X

Small ribosomal subunit protein mS33