IL_9HLZ_137
3D structure
- PDB id
- 9HLZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Translational activators Aep1, Aep2 and Atp25 in complex with mRNA and the yeast mitochondrial ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- UAAAA*UUUAA
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9HLZ_137 not in the Motif Atlas
- Geometric match to IL_2A64_006
- Geometric discrepancy: 0.2759
- The information below is about IL_2A64_006
- Detailed Annotation
- Triple sheared
- Broad Annotation
- No text annotation
- Motif group
- IL_15190.2
- Basepair signature
- cWW-tSH-tHS-tHS-cWW
- Number of instances in this motif group
- 24
Unit IDs
9HLZ|1|r|U|1293
9HLZ|1|r|A|1294
9HLZ|1|r|A|1295
9HLZ|1|r|A|1296
9HLZ|1|r|A|1297
*
9HLZ|1|r|U|1312
9HLZ|1|r|U|1313
9HLZ|1|r|U|1314
9HLZ|1|r|A|1315
9HLZ|1|r|A|1316
Current chains
- Chain r
- 15S mitochondrial rRNA
Nearby chains
- Chain 7
- Small ribosomal subunit protein mS46
- Chain S
- Small ribosomal subunit protein uS19m
- Chain W
- Small ribosomal subunit protein mS29
- Chain X
- Small ribosomal subunit protein mS33
- Chain Y
- Small ribosomal subunit protein mS35
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