IL_9HM0_027
3D structure
- PDB id
- 9HM0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Translational activator Aep3 in complex with mRNA and the yeast mitochondrial ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- AAGA*UCU
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9HM0_027 not in the Motif Atlas
- Geometric match to IL_7SZU_003
- Geometric discrepancy: 0.2396
- The information below is about IL_7SZU_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_75527.2
- Basepair signature
- cWW-cWW-cSH-cWW
- Number of instances in this motif group
- 10
Unit IDs
9HM0|1|AA|A|919
9HM0|1|AA|A|920
9HM0|1|AA|G|921
9HM0|1|AA|A|922
*
9HM0|1|AA|U|1179
9HM0|1|AA|C|1180
9HM0|1|AA|U|1181
Current chains
- Chain AA
- 21S mitochondrial rRNA
Nearby chains
- Chain 44
- Large ribosomal subunit protein mL43
- Chain NN
- Large ribosomal subunit protein bL21m
- Chain OO
- Large ribosomal subunit protein uL22m
- Chain UU
- Large ribosomal subunit protein uL30m
- Chain aa
- Large ribosomal subunit protein mL58
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