IL_9HM0_077

3D structure

PDB id

9HM0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Translational activator Aep3 in complex with mRNA and the yeast mitochondrial ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CGAAAGA*UUGUAAG

Length

14 nucleotides

Bulged bases

9HM0|1|AA|U|2748

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9HM0|1|AA|C|2731
9HM0|1|AA|G|2732
9HM0|1|AA|A|2733
9HM0|1|AA|A|2734
9HM0|1|AA|A|2735
9HM0|1|AA|G|2736
9HM0|1|AA|A|2737
*
9HM0|1|AA|U|2745
9HM0|1|AA|U|2746
9HM0|1|AA|G|2747
9HM0|1|AA|U|2748
9HM0|1|AA|A|2749
9HM0|1|AA|A|2750
9HM0|1|AA|G|2751

Current chains

Chain AA

21S mitochondrial rRNA

Nearby chains

Chain 00

Large ribosomal subunit protein bL36m

Chain KK

Large ribosomal subunit protein uL16m