IL_9HM0_141
3D structure
- PDB id
- 9HM0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Translational activator Aep3 in complex with mRNA and the yeast mitochondrial ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- AUGAUAAUAAAA*UAUAAAACAU
- Length
- 22 nucleotides
- Bulged bases
- 9HM0|1|r|U|1280, 9HM0|1|r|U|1326
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9HM0|1|r|A|1276
9HM0|1|r|U|1277
9HM0|1|r|G|1278
9HM0|1|r|A|1279
9HM0|1|r|U|1280
9HM0|1|r|A|1281
9HM0|1|r|A|1282
9HM0|1|r|U|1283
9HM0|1|r|A|1284
9HM0|1|r|A|1285
9HM0|1|r|A|1286
9HM0|1|r|A|1287
*
9HM0|1|r|U|1324
9HM0|1|r|A|1325
9HM0|1|r|U|1326
9HM0|1|r|A|1327
9HM0|1|r|A|1328
9HM0|1|r|A|1329
9HM0|1|r|A|1330
9HM0|1|r|C|1331
9HM0|1|r|A|1332
9HM0|1|r|U|1333
Current chains
- Chain r
- 15S mitochondrial rRNA
Nearby chains
- Chain G
- Small ribosomal subunit protein uS7m
- Chain I
- Small ribosomal subunit protein uS9m
- Chain J
- Small ribosomal subunit protein uS10m
- Chain N
- Small ribosomal subunit protein uS14m
- Chain W
- Small ribosomal subunit protein mS29
- Chain Y
- Small ribosomal subunit protein mS35
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