IL_9HM0_142
3D structure
- PDB id
- 9HM0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Translational activator Aep3 in complex with mRNA and the yeast mitochondrial ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- UUAUA*UUAAUAA
- Length
- 12 nucleotides
- Bulged bases
- 9HM0|1|r|U|1291, 9HM0|1|r|A|1320, 9HM0|1|r|U|1321
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9HM0|1|r|U|1288
9HM0|1|r|U|1289
9HM0|1|r|A|1290
9HM0|1|r|U|1291
9HM0|1|r|A|1292
*
9HM0|1|r|U|1317
9HM0|1|r|U|1318
9HM0|1|r|A|1319
9HM0|1|r|A|1320
9HM0|1|r|U|1321
9HM0|1|r|A|1322
9HM0|1|r|A|1323
Current chains
- Chain r
- 15S mitochondrial rRNA
Nearby chains
- Chain C
- Small ribosomal subunit protein uS3m
- Chain J
- Small ribosomal subunit protein uS10m
- Chain N
- Small ribosomal subunit protein uS14m
- Chain X
- Small ribosomal subunit protein mS33
- Chain Y
- Small ribosomal subunit protein mS35
Coloring options: