IL_9HM0_152

3D structure

PDB id

9HM0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Translational activator Aep3 in complex with mRNA and the yeast mitochondrial ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

UUUAU*AUUUA

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9HM0|1|r|U|1505
9HM0|1|r|U|1506
9HM0|1|r|U|1507
9HM0|1|r|A|1508
9HM0|1|r|U|1509
*
9HM0|1|r|A|1553
9HM0|1|r|U|1554
9HM0|1|r|U|1555
9HM0|1|r|U|1556
9HM0|1|r|A|1557

Current chains

Chain r

15S mitochondrial rRNA

Nearby chains

Chain AA

Large subunit ribosomal RNA; LSU rRNA

Chain MM

Large ribosomal subunit protein bL19m

Chain O

Small ribosomal subunit protein uS15m