IL_9HUS_045

3D structure

PDB id

9HUS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of WT E.coli ribosome with complexed filament nascent chain at length 31, with P-site tRNAs

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

GGUU*AC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9HUS_045 not in the Motif Atlas

Geometric match to IL_9E6Q_008

Geometric discrepancy: 0.1301

The information below is about IL_9E6Q_008

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_74641.2

Basepair signature

cWW-tSH-cWW-L

Number of instances in this motif group

33

Unit IDs

9HUS|1|b|G|1310
9HUS|1|b|G|1311
9HUS|1|b|U|1312
9HUS|1|b|U|1313
*
9HUS|1|b|A|1603
9HUS|1|b|C|1604

Current chains

Chain b

23S rRNA

Nearby chains

Chain 6

Large ribosomal subunit protein bL34

Chain t

Large ribosomal subunit protein uL23